Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C12orf4Q9NQ89 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 MESTP1-201ENST00000404287 994 ntBASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C12orf4Q9NQ89 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 AC126755.1-201ENST00000525846 6405 ntBASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 PHGDH-209ENST00000641074 1780 ntBASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 MFAP1P1-201ENST00000442257 1255 ntBASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 MIR3180-5-201ENST00000583743 153 ntBASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 FAM197Y4-202ENST00000622692 608 ntBASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms