Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 AL355802.2-201ENST00000402069 882 ntBASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 MIR6786-201ENST00000616843 113 ntBASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 PCDH8P1-201ENST00000428983 2773 ntBASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SND1-IT1Q9HBX3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 PCDHA14-201ENST00000506751 2298 ntBASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 AC106886.4-201ENST00000623557 2502 ntBASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 CICP6-201ENST00000457191 2729 ntBASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SND1-IT1Q9HBX3 AC011506.1-201ENST00000474329 610 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms