Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC111152.3-201ENST00000569699 673 ntBASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AC006116.5-201ENST00000591936 559 ntBASIC19.76■□□□□ 0.75
RNF39Q9H2S5 FAM72A-208ENST00000607379 1139 ntBASIC19.76■□□□□ 0.75
RNF39Q9H2S5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 RPS20P22-202ENST00000488192 1318 ntBASIC19.76■□□□□ 0.75
RNF39Q9H2S5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AL031598.1-201ENST00000561511 1773 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 CSTA-202ENST00000479204 821 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC010627.1-201ENST00000503819 1294 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 KRT18P31-201ENST00000506277 1292 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC113404.2-201ENST00000507884 177 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC119751.5-201ENST00000514077 770 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC091304.2-201ENST00000564639 760 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 Z69720.1-201ENST00000601483 472 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC099336.1-202ENST00000602961 463 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
RNF39Q9H2S5 FBXL21-201ENST00000297158 1305 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 LINC00852-201ENST00000475197 1328 ntBASIC19.75■□□□□ 0.75
RNF39Q9H2S5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 KCTD10P1-201ENST00000434203 625 ntBASIC19.74■□□□□ 0.75
RNF39Q9H2S5 AC013439.1-201ENST00000449965 1239 ntBASIC19.74■□□□□ 0.75
RNF39Q9H2S5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 AC139103.1-201ENST00000534696 1030 ntBASIC19.74■□□□□ 0.75
RNF39Q9H2S5 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 AC073167.1-201ENST00000559303 580 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 NSUN5P1-202ENST00000421140 1535 ntBASIC19.74■□□□□ 0.75
RNF39Q9H2S5 NSUN5P2-203ENST00000457352 1529 ntBASIC19.74■□□□□ 0.75
RNF39Q9H2S5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 CROCCP3-202ENST00000420820 1947 ntBASIC19.74■□□□□ 0.75
RNF39Q9H2S5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF39Q9H2S5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 VPS26BP1-201ENST00000417155 755 ntBASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AC025572.1-201ENST00000472243 553 ntTSL 4 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms