Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FAM185BP-201ENST00000443595 716 ntBASIC23.27■■□□□ 1.32
ABCA3Q99758 RN7SL692P-201ENST00000464677 288 ntBASIC23.27■■□□□ 1.32
ABCA3Q99758 AC069120.2-201ENST00000524091 540 ntBASIC23.27■■□□□ 1.32
ABCA3Q99758 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ABCA3Q99758 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC23.27■■□□□ 1.32
ABCA3Q99758 MIR6080-201ENST00000617359 66 ntBASIC23.27■■□□□ 1.32
ABCA3Q99758 RAB34-224ENST00000636513 888 ntTSL 5 BASIC23.27■■□□□ 1.32
ABCA3Q99758 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ABCA3Q99758 AC129492.6-201ENST00000611383 1305 ntBASIC23.26■■□□□ 1.31
ABCA3Q99758 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.26■■□□□ 1.31
ABCA3Q99758 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ABCA3Q99758 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.26■■□□□ 1.31
ABCA3Q99758 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.26■■□□□ 1.31
ABCA3Q99758 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.26■■□□□ 1.31
ABCA3Q99758 HNRNPA1P40-201ENST00000426371 1278 ntBASIC23.26■■□□□ 1.31
ABCA3Q99758 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.26■■□□□ 1.31
ABCA3Q99758 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC23.26■■□□□ 1.31
ABCA3Q99758 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 GNAS-203ENST00000306120 1878 ntBASIC23.26■■□□□ 1.31
ABCA3Q99758 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ABCA3Q99758 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.25■■□□□ 1.31
ABCA3Q99758 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ABCA3Q99758 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC23.25■■□□□ 1.31
ABCA3Q99758 HLA-V-201ENST00000429037 534 ntBASIC23.25■■□□□ 1.31
ABCA3Q99758 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.25■■□□□ 1.31
ABCA3Q99758 AC025048.6-201ENST00000634326 1161 ntBASIC23.25■■□□□ 1.31
ABCA3Q99758 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC23.25■■□□□ 1.31
ABCA3Q99758 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
ABCA3Q99758 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 GK-202ENST00000378941 458 ntTSL 3 BASIC23.25■■□□□ 1.31
ABCA3Q99758 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC23.25■■□□□ 1.31
ABCA3Q99758 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC23.25■■□□□ 1.31
ABCA3Q99758 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC23.25■■□□□ 1.31
ABCA3Q99758 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.25■■□□□ 1.31
ABCA3Q99758 AC008677.1-201ENST00000519230 1561 ntBASIC23.25■■□□□ 1.31
ABCA3Q99758 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ABCA3Q99758 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC23.25■■□□□ 1.31
ABCA3Q99758 FAM86C2P-203ENST00000528684 1004 ntBASIC23.25■■□□□ 1.31
ABCA3Q99758 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC23.25■■□□□ 1.31
ABCA3Q99758 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.24■■□□□ 1.31
ABCA3Q99758 GOLGA6L11P-201ENST00000417252 1298 ntBASIC23.24■■□□□ 1.31
ABCA3Q99758 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC23.24■■□□□ 1.31
ABCA3Q99758 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC23.24■■□□□ 1.31
ABCA3Q99758 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
ABCA3Q99758 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC23.24■■□□□ 1.31
ABCA3Q99758 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ABCA3Q99758 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.24■■□□□ 1.31
ABCA3Q99758 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC23.23■■□□□ 1.31
ABCA3Q99758 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ABCA3Q99758 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ABCA3Q99758 RBPMS2P1-201ENST00000437762 623 ntBASIC23.23■■□□□ 1.31
ABCA3Q99758 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC23.23■■□□□ 1.31
ABCA3Q99758 INGX-202ENST00000489074 768 ntBASIC23.23■■□□□ 1.31
ABCA3Q99758 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC23.23■■□□□ 1.31
ABCA3Q99758 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ABCA3Q99758 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ABCA3Q99758 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
ABCA3Q99758 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
ABCA3Q99758 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ABCA3Q99758 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23.23■■□□□ 1.31
ABCA3Q99758 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ABCA3Q99758 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC23.22■■□□□ 1.31
ABCA3Q99758 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC23.22■■□□□ 1.31
ABCA3Q99758 SPCS2P4-201ENST00000436160 681 ntBASIC23.22■■□□□ 1.31
ABCA3Q99758 SERBP1P5-201ENST00000510079 1181 ntBASIC23.22■■□□□ 1.31
ABCA3Q99758 SRP9-204ENST00000619790 377 ntTSL 2 BASIC23.22■■□□□ 1.31
ABCA3Q99758 AC084121.4-201ENST00000641598 221 ntBASIC23.22■■□□□ 1.31
ABCA3Q99758 AF228730.8-201ENST00000642140 221 ntBASIC23.22■■□□□ 1.31
ABCA3Q99758 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
ABCA3Q99758 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ABCA3Q99758 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ABCA3Q99758 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ABCA3Q99758 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ABCA3Q99758 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
ABCA3Q99758 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ABCA3Q99758 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ABCA3Q99758 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms