Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.93□□□□□ -0.34
MUC4Q99102 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.93□□□□□ -0.34
MUC4Q99102 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MUC4Q99102 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MUC4Q99102 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 AC124067.4-201ENST00000519691 2379 ntBASIC12.92□□□□□ -0.34
MUC4Q99102 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
MUC4Q99102 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.92□□□□□ -0.34
MUC4Q99102 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.92□□□□□ -0.34
MUC4Q99102 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.92□□□□□ -0.34
MUC4Q99102 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.92□□□□□ -0.34
MUC4Q99102 GCSHP2-201ENST00000560971 527 ntBASIC12.92□□□□□ -0.34
MUC4Q99102 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.92□□□□□ -0.34
MUC4Q99102 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.92□□□□□ -0.34
MUC4Q99102 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 AL023806.1-201ENST00000603994 1649 ntBASIC12.92□□□□□ -0.34
MUC4Q99102 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 NKILA-202ENST00000614771 2598 ntBASIC12.92□□□□□ -0.34
MUC4Q99102 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
MUC4Q99102 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
MUC4Q99102 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
MUC4Q99102 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.92□□□□□ -0.34
MUC4Q99102 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
MUC4Q99102 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MUC4Q99102 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.92□□□□□ -0.34
MUC4Q99102 AL391807.1-203ENST00000604392 2365 ntBASIC12.92□□□□□ -0.34
MUC4Q99102 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MUC4Q99102 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 FAM8A6P-201ENST00000407496 1135 ntBASIC12.91□□□□□ -0.34
MUC4Q99102 RASA4DP-201ENST00000460726 1199 ntBASIC12.91□□□□□ -0.34
MUC4Q99102 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.91□□□□□ -0.34
MUC4Q99102 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MUC4Q99102 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MUC4Q99102 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MUC4Q99102 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 HLA-J-201ENST00000462773 1622 ntBASIC12.91□□□□□ -0.34
MUC4Q99102 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.91□□□□□ -0.34
MUC4Q99102 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.91□□□□□ -0.34
MUC4Q99102 AC069148.1-201ENST00000608741 768 ntBASIC12.91□□□□□ -0.34
MUC4Q99102 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MUC4Q99102 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MUC4Q99102 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MUC4Q99102 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.9□□□□□ -0.34
MUC4Q99102 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.9□□□□□ -0.34
MUC4Q99102 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 RNF152P1-201ENST00000397754 604 ntBASIC12.9□□□□□ -0.34
MUC4Q99102 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.9□□□□□ -0.34
MUC4Q99102 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.9□□□□□ -0.34
MUC4Q99102 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.9□□□□□ -0.34
MUC4Q99102 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.9□□□□□ -0.34
MUC4Q99102 AC024563.2-201ENST00000603282 481 ntBASIC12.9□□□□□ -0.34
MUC4Q99102 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
MUC4Q99102 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MUC4Q99102 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms