Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HAPLN3Q96S86 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HAPLN3Q96S86 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HAPLN3Q96S86 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HAPLN3Q96S86 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HAPLN3Q96S86 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 AL591684.3-201ENST00000605187 298 ntBASIC18.28■□□□□ 0.52
HAPLN3Q96S86 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HAPLN3Q96S86 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 AC067852.2-201ENST00000590513 2313 ntBASIC18.27■□□□□ 0.52
HAPLN3Q96S86 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 LINC00304-203ENST00000565008 1864 ntBASIC18.27■□□□□ 0.52
HAPLN3Q96S86 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 AC002558.1-201ENST00000488906 803 ntBASIC18.27■□□□□ 0.52
HAPLN3Q96S86 KRT18P31-201ENST00000506277 1292 ntBASIC18.27■□□□□ 0.52
HAPLN3Q96S86 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.27■□□□□ 0.52
HAPLN3Q96S86 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.27■□□□□ 0.52
HAPLN3Q96S86 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HAPLN3Q96S86 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HAPLN3Q96S86 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.27■□□□□ 0.51
HAPLN3Q96S86 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 AL049757.1-201ENST00000616842 1596 ntBASIC18.26■□□□□ 0.51
HAPLN3Q96S86 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 AC091304.2-201ENST00000564639 760 ntBASIC18.26■□□□□ 0.51
HAPLN3Q96S86 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 AC012313.10-201ENST00000623509 926 ntBASIC18.26■□□□□ 0.51
HAPLN3Q96S86 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 HLA-J-201ENST00000462773 1622 ntBASIC18.26■□□□□ 0.51
HAPLN3Q96S86 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HAPLN3Q96S86 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms