Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 AC109462.3-201ENST00000573934 613 ntBASIC14.69□□□□□ -0.06
GAFA1Q96PS6 MIR5100-201ENST00000579544 119 ntBASIC14.69□□□□□ -0.06
GAFA1Q96PS6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 PCDHB18P-201ENST00000524813 2368 ntBASIC14.68□□□□□ -0.06
GAFA1Q96PS6 AC005332.8-201ENST00000622750 2735 ntBASIC14.68□□□□□ -0.06
GAFA1Q96PS6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 KRT16P4-201ENST00000453883 522 ntBASIC14.68□□□□□ -0.06
GAFA1Q96PS6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 AL591684.3-201ENST00000605187 298 ntBASIC14.68□□□□□ -0.06
GAFA1Q96PS6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GAFA1Q96PS6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 IGHV3-52-201ENST00000519770 353 ntBASIC14.67□□□□□ -0.06
GAFA1Q96PS6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.67□□□□□ -0.06
GAFA1Q96PS6 AL121772.3-201ENST00000610840 674 ntBASIC14.67□□□□□ -0.06
GAFA1Q96PS6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 AL049757.1-201ENST00000616842 1596 ntBASIC14.67□□□□□ -0.06
GAFA1Q96PS6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms