Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC007274.1-201ENST00000439805 662 ntBASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 AL512356.2-201ENST00000546955 174 ntBASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 TUBB3P1-201ENST00000405796 1332 ntBASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 AL592309.1-201ENST00000443127 649 ntBASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM43Q96BQ3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 SPDYE11-202ENST00000450699 704 ntBASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 IGHV3-52-201ENST00000519770 353 ntBASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 SPDYE9P-201ENST00000570642 692 ntBASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 SPDYE10P-202ENST00000612005 668 ntBASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 SPDYE8P-202ENST00000612377 668 ntBASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM43Q96BQ3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 AC079140.1-201ENST00000508039 487 ntBASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 AP005018.1-201ENST00000525475 301 ntBASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 FAM86C2P-203ENST00000528684 1004 ntBASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 AC126763.1-201ENST00000552015 2118 ntBASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 LINC02560-201ENST00000596379 459 ntBASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 AC008761.3-201ENST00000624803 892 ntBASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM43Q96BQ3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRIM43Q96BQ3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.02■□□□□ 0.63
TRIM43Q96BQ3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms