Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.41
TRIM41Q8WV44 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.41
TRIM41Q8WV44 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.41
TRIM41Q8WV44 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 MED16-201ENST00000269814 1199 ntTSL 5 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 AC236430.1-201ENST00000402231 743 ntBASIC30.13■■■□□ 2.41
TRIM41Q8WV44 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 AC064836.3-201ENST00000607928 673 ntBASIC30.13■■■□□ 2.41
TRIM41Q8WV44 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC30.13■■■□□ 2.41
TRIM41Q8WV44 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 BICD1-207ENST00000551848 1962 ntBASIC30.12■■■□□ 2.41
TRIM41Q8WV44 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 TERF1P3-201ENST00000505638 1227 ntBASIC30.12■■■□□ 2.41
TRIM41Q8WV44 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 GZMM-202ENST00000592501 941 ntTSL 3 BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM41Q8WV44 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM41Q8WV44 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 PMS2P4-201ENST00000412466 1052 ntBASIC30.1■■■□□ 2.41
TRIM41Q8WV44 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 RNF34-208ENST00000555076 593 ntTSL 3 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 TBC1D3P5-201ENST00000579401 1545 ntBASIC30.1■■■□□ 2.41
TRIM41Q8WV44 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM41Q8WV44 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
TRIM41Q8WV44 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
TRIM41Q8WV44 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
TRIM41Q8WV44 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TRIM41Q8WV44 INIP-202ENST00000374236 874 ntTSL 2 BASIC30.09■■■□□ 2.41
TRIM41Q8WV44 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TRIM41Q8WV44 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TRIM41Q8WV44 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms