Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SSH3Q8TE77 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
SSH3Q8TE77 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSH3Q8TE77 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSH3Q8TE77 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSH3Q8TE77 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.76■■□□□ 1.07
SSH3Q8TE77 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SSH3Q8TE77 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 AC008608.2-201ENST00000606089 416 ntBASIC21.75■■□□□ 1.07
SSH3Q8TE77 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.75■■□□□ 1.07
SSH3Q8TE77 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSH3Q8TE77 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.74■■□□□ 1.07
SSH3Q8TE77 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 KLF4P1-201ENST00000412782 1185 ntBASIC21.74■■□□□ 1.07
SSH3Q8TE77 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 STK19B-204ENST00000512515 211 ntBASIC21.74■■□□□ 1.07
SSH3Q8TE77 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.74■■□□□ 1.07
SSH3Q8TE77 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSH3Q8TE77 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSH3Q8TE77 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSH3Q8TE77 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSH3Q8TE77 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSH3Q8TE77 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSH3Q8TE77 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSH3Q8TE77 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SSH3Q8TE77 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 AL020989.1-201ENST00000422979 469 ntBASIC21.72■■□□□ 1.07
SSH3Q8TE77 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 NKAPP1-205ENST00000585790 367 ntBASIC21.72■■□□□ 1.07
SSH3Q8TE77 AC104692.2-201ENST00000603054 253 ntBASIC21.72■■□□□ 1.07
SSH3Q8TE77 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms