Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 LINC00167-201ENST00000530583 1419 ntBASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 AL157888.1-201ENST00000631930 593 ntBASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 AL121761.2-201ENST00000598007 1648 ntBASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCHCR1Q8TD31 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 AP001094.4-201ENST00000579008 2176 ntBASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 AL356309.3-201ENST00000624132 1934 ntBASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 AL118508.1-201ENST00000613502 2345 ntBASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCHCR1Q8TD31 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 AC018695.7-201ENST00000624587 2492 ntBASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms