Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 TMPRSS11CP-201ENST00000453277 683 ntBASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 KRT8P23-201ENST00000560090 1207 ntBASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.33■■□□□ 1.32
COL22A1Q8NFW1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 AC241585.1-201ENST00000433527 519 ntBASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 IGHV3-71-201ENST00000523324 359 ntBASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL22A1Q8NFW1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 AC100757.3-201ENST00000622361 1406 ntBASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
COL22A1Q8NFW1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 CD7-202ENST00000578509 925 ntTSL 3 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AL009183.1-201ENST00000603760 355 ntBASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AC116407.2-201ENST00000613639 860 ntBASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AL161645.1-201ENST00000622716 1255 ntBASIC23.3■■□□□ 1.32
COL22A1Q8NFW1 AC007952.6-201ENST00000573168 2673 ntBASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 AC003957.1-201ENST00000625108 2673 ntBASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 ALG1L8P-201ENST00000533887 760 ntBASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL22A1Q8NFW1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms