Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 AC097374.2-201ENST00000618617 1306 ntBASIC16.55■□□□□ 0.24
NUP43Q8NFH3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 FAM86EP-206ENST00000510506 987 ntBASIC16.55■□□□□ 0.24
NUP43Q8NFH3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 AL645608.8-201ENST00000606034 2086 ntBASIC16.54■□□□□ 0.24
NUP43Q8NFH3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 BX276092.5-203ENST00000456199 560 ntBASIC16.54■□□□□ 0.24
NUP43Q8NFH3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 AC087388.1-201ENST00000571370 1112 ntBASIC16.54■□□□□ 0.24
NUP43Q8NFH3 AC011840.4-201ENST00000578471 627 ntBASIC16.54■□□□□ 0.24
NUP43Q8NFH3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUP43Q8NFH3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 AL121672.3-201ENST00000608644 468 ntBASIC16.53■□□□□ 0.24
NUP43Q8NFH3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.53■□□□□ 0.24
NUP43Q8NFH3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 AL023806.1-201ENST00000603994 1649 ntBASIC16.52■□□□□ 0.24
NUP43Q8NFH3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUP43Q8NFH3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms