Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 PMS2P4-201ENST00000412466 1052 ntBASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 AC087641.1-201ENST00000557561 1021 ntBASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 AC004790.2-201ENST00000623588 572 ntBASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 AC004877.2-201ENST00000623941 599 ntBASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC27.39■■□□□ 1.98
CFAP43Q8NDM7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC27.39■■□□□ 1.98
CFAP43Q8NDM7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC27.39■■□□□ 1.98
CFAP43Q8NDM7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 AC190387.1-201ENST00000551683 408 ntBASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 AL390955.2-201ENST00000603032 514 ntBASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CFAP43Q8NDM7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 AC138028.4-201ENST00000564984 1845 ntBASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 AL020989.1-201ENST00000422979 469 ntBASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 MIR4745-201ENST00000577608 62 ntBASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 AC012645.4-201ENST00000610691 1061 ntBASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CFAP43Q8NDM7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 AF228730.6-201ENST00000641497 218 ntBASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 AC084121.3-201ENST00000641716 218 ntBASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 AC105233.6-201ENST00000642093 218 ntBASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CFAP43Q8NDM7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 AC015911.4-201ENST00000588022 1070 ntBASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 AC116407.2-201ENST00000613639 860 ntBASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 AC069262.1-201ENST00000539058 672 ntBASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 LINC00304-203ENST00000565008 1864 ntBASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CFAP43Q8NDM7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms