Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20■□□□□ 0.79
RETREG2Q8NC44 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RETREG2Q8NC44 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20■□□□□ 0.79
RETREG2Q8NC44 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20■□□□□ 0.79
RETREG2Q8NC44 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20■□□□□ 0.79
RETREG2Q8NC44 MTCL1P1-201ENST00000446207 792 ntBASIC20■□□□□ 0.79
RETREG2Q8NC44 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20■□□□□ 0.79
RETREG2Q8NC44 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20■□□□□ 0.79
RETREG2Q8NC44 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20■□□□□ 0.79
RETREG2Q8NC44 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20■□□□□ 0.79
RETREG2Q8NC44 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20■□□□□ 0.79
RETREG2Q8NC44 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20■□□□□ 0.79
RETREG2Q8NC44 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RETREG2Q8NC44 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RETREG2Q8NC44 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RETREG2Q8NC44 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 BX842568.4-201ENST00000421222 227 ntBASIC19.99■□□□□ 0.79
RETREG2Q8NC44 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 AC005336.2-201ENST00000593183 939 ntBASIC19.99■□□□□ 0.79
RETREG2Q8NC44 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 MIR7706-201ENST00000613747 67 ntBASIC19.99■□□□□ 0.79
RETREG2Q8NC44 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETREG2Q8NC44 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 PHGDH-209ENST00000641074 1780 ntBASIC19.98■□□□□ 0.79
RETREG2Q8NC44 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 AC116407.3-201ENST00000623905 1129 ntBASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RETREG2Q8NC44 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms