Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 AC093503.3-201ENST00000624917 2352 ntBASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 KRT18P32-201ENST00000424695 1287 ntBASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
COL27A1Q8IZC6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 GPS2P2-201ENST00000430745 888 ntBASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 AL135744.1-201ENST00000565098 629 ntBASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL27A1Q8IZC6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.46■□□□□ 0.22
COL27A1Q8IZC6 REXO1L9P-201ENST00000604264 2108 ntBASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 AL355306.1-201ENST00000415580 579 ntBASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL27A1Q8IZC6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 SPDYE11-202ENST00000450699 704 ntBASIC16.44■□□□□ 0.22
COL27A1Q8IZC6 AC112191.1-201ENST00000523689 701 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms