Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 AC007967.3-201ENST00000434308 558 ntBASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 DRAXINP1-201ENST00000437611 948 ntBASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 AP002383.4-201ENST00000442518 975 ntBASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 AC069148.1-201ENST00000608741 768 ntBASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC65Q8IXS2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 AP002414.4-201ENST00000589764 1148 ntBASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC65Q8IXS2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 AC233702.3-201ENST00000578656 1387 ntBASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 AC091607.1-201ENST00000490318 1060 ntBASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 TPSP2-201ENST00000561760 610 ntBASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 Z69720.1-201ENST00000601483 472 ntBASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC65Q8IXS2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms