Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AL138781.2-201ENST00000617896 1843 ntBASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 GPR89P-201ENST00000407924 1495 ntBASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AC100803.2-201ENST00000562459 1963 ntBASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 HTR5BP-201ENST00000430851 1154 ntBASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 STK25P1-201ENST00000585406 838 ntBASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 AL078644.1-201ENST00000609881 752 ntBASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS3Q8IXF0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
NPAS3Q8IXF0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NPAS3Q8IXF0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 AC254562.1-201ENST00000417586 456 ntBASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 AC010654.1-201ENST00000615722 808 ntBASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NPAS3Q8IXF0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 MKNK2P1-201ENST00000437526 628 ntBASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS3Q8IXF0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms