Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL353593.2-201ENST00000602529 1483 ntBASIC19.06■□□□□ 0.64
HERC6Q8IVU3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 AC239800.4-201ENST00000603712 296 ntBASIC19.06■□□□□ 0.64
HERC6Q8IVU3 AC010654.1-201ENST00000615722 808 ntBASIC19.06■□□□□ 0.64
HERC6Q8IVU3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 AC004877.2-201ENST00000623941 599 ntBASIC19.06■□□□□ 0.64
HERC6Q8IVU3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 AC148477.5-201ENST00000625164 1645 ntBASIC19.06■□□□□ 0.64
HERC6Q8IVU3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 COX20P2-201ENST00000452636 358 ntBASIC19.05■□□□□ 0.64
HERC6Q8IVU3 AP000344.2-201ENST00000512987 629 ntBASIC19.05■□□□□ 0.64
HERC6Q8IVU3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 AC093503.3-201ENST00000624917 2352 ntBASIC19.05■□□□□ 0.64
HERC6Q8IVU3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERC6Q8IVU3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AC132938.5-201ENST00000624980 1813 ntBASIC19.04■□□□□ 0.64
HERC6Q8IVU3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 SIRPAP1-201ENST00000448467 1770 ntBASIC19.04■□□□□ 0.64
HERC6Q8IVU3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AL139400.1-201ENST00000366220 510 ntBASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AC096734.2-201ENST00000562054 433 ntBASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AC010507.1-201ENST00000633895 436 ntBASIC19.04■□□□□ 0.64
HERC6Q8IVU3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERC6Q8IVU3 NEFHP1-201ENST00000412845 2629 ntBASIC19.04■□□□□ 0.64
HERC6Q8IVU3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 BCAR1-209ENST00000546196 1340 ntBASIC19.03■□□□□ 0.64
HERC6Q8IVU3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 MRPL20P1-201ENST00000400819 433 ntBASIC19.03■□□□□ 0.64
HERC6Q8IVU3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms