Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC50Q8IVM0 AC108860.2-201ENST00000562760 2183 ntBASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 SLC25A3P1-201ENST00000443844 931 ntBASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC50Q8IVM0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AC024563.2-201ENST00000603282 481 ntBASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AC116407.2-201ENST00000613639 860 ntBASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AL138966.2-201ENST00000621997 464 ntBASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC50Q8IVM0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 AC009949.1-201ENST00000623048 1830 ntBASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC50Q8IVM0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms