Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
PACS1Q6VY07 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.88■□□□□ 0.45
PACS1Q6VY07 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PACS1Q6VY07 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS1Q6VY07 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
PACS1Q6VY07 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 AC022211.2-201ENST00000585075 2527 ntBASIC17.87■□□□□ 0.45
PACS1Q6VY07 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 KRT18P65-201ENST00000439811 1286 ntBASIC17.87■□□□□ 0.45
PACS1Q6VY07 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 AL390719.2-201ENST00000606993 987 ntBASIC17.87■□□□□ 0.45
PACS1Q6VY07 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 AD000864.1-201ENST00000624076 2295 ntBASIC17.87■□□□□ 0.45
PACS1Q6VY07 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACS1Q6VY07 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.87■□□□□ 0.45
PACS1Q6VY07 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.87■□□□□ 0.45
PACS1Q6VY07 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 LINC01451-201ENST00000623792 534 ntBASIC17.86■□□□□ 0.45
PACS1Q6VY07 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.86■□□□□ 0.45
PACS1Q6VY07 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACS1Q6VY07 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 AC005332.3-201ENST00000589904 676 ntBASIC17.85■□□□□ 0.45
PACS1Q6VY07 KRT8P47-201ENST00000604727 1398 ntBASIC17.85■□□□□ 0.45
PACS1Q6VY07 AL139384.1-201ENST00000612143 3047 ntBASIC17.85■□□□□ 0.45
PACS1Q6VY07 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.85■□□□□ 0.45
PACS1Q6VY07 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACS1Q6VY07 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms