Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AC004706.3-202ENST00000621574 984 ntBASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 PGM5P2-202ENST00000637225 1043 ntBASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCDC62Q6P9F0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 DDX43P3-201ENST00000441064 443 ntBASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 MIR1199-201ENST00000621445 119 ntBASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC62Q6P9F0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 AC007967.2-201ENST00000432613 625 ntBASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 AC109462.3-201ENST00000573934 613 ntBASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 AC116407.2-201ENST00000613639 860 ntBASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 AC005593.1-201ENST00000624894 515 ntBASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC62Q6P9F0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms