Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 AC060834.1-201ENST00000443027 2032 ntBASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 AL139327.4-201ENST00000612362 153 ntBASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 AL023973.1-201ENST00000624619 620 ntBASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 AC106886.4-201ENST00000623557 2502 ntBASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.66■□□□□ 0.26
LRIF1Q5T3J3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 AGGF1P2-201ENST00000426656 2106 ntBASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIF1Q5T3J3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRIF1Q5T3J3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRIF1Q5T3J3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRIF1Q5T3J3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRIF1Q5T3J3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
LRIF1Q5T3J3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms