Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 SIGLEC30P-201ENST00000455569 941 ntBASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 AC055717.3-201ENST00000622967 595 ntBASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RNFT1Q5M7Z0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 AC005104.2-201ENST00000427818 678 ntBASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 PGM5P2-202ENST00000637225 1043 ntBASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNFT1Q5M7Z0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AC023274.1-201ENST00000418278 595 ntBASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 KRT18P2-201ENST00000447938 1258 ntBASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 RNA5SP416-201ENST00000516838 111 ntBASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AC010327.4-202ENST00000591484 748 ntBASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNFT1Q5M7Z0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms