Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RUNDC3AQ59EK9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RUNDC3AQ59EK9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 BX276092.7-203ENST00000637198 1536 ntBASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 MMP23A-201ENST00000234610 1017 ntBASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RUNDC3AQ59EK9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 AGGF1P2-201ENST00000426656 2106 ntBASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RUNDC3AQ59EK9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 AC112698.1-201ENST00000510299 916 ntBASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 GCSHP2-201ENST00000560971 527 ntBASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 AC009154.2-201ENST00000621177 724 ntBASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 AC060834.1-201ENST00000443027 2032 ntBASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 FER1L4-210ENST00000615531 5998 ntBASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 LINC01311-201ENST00000565162 1445 ntBASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 AC116353.5-201ENST00000638148 1699 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms