Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CNTNAP1P78357 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNTNAP1P78357 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP1P78357 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 AC093677.2-201ENST00000600169 1863 ntBASIC20.88■□□□□ 0.93
CNTNAP1P78357 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 LINC02560-201ENST00000596379 459 ntBASIC20.88■□□□□ 0.93
CNTNAP1P78357 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 REXO1L3P-201ENST00000622202 1288 ntBASIC20.88■□□□□ 0.93
CNTNAP1P78357 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNTNAP1P78357 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP1P78357 AC018445.3-201ENST00000624177 1945 ntBASIC20.88■□□□□ 0.93
CNTNAP1P78357 AC025580.3-201ENST00000617932 1424 ntBASIC20.87■□□□□ 0.93
CNTNAP1P78357 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 AC109462.3-201ENST00000573934 613 ntBASIC20.87■□□□□ 0.93
CNTNAP1P78357 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 AL358472.5-202ENST00000641448 1267 ntBASIC20.87■□□□□ 0.93
CNTNAP1P78357 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP1P78357 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP1P78357 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.86■□□□□ 0.93
CNTNAP1P78357 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 AC051619.7-201ENST00000568314 623 ntBASIC20.86■□□□□ 0.93
CNTNAP1P78357 STK25P1-201ENST00000585406 838 ntBASIC20.86■□□□□ 0.93
CNTNAP1P78357 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 SLC25A24-204ENST00000569674 2357 ntBASIC20.86■□□□□ 0.93
CNTNAP1P78357 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP1P78357 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.86■□□□□ 0.93
CNTNAP1P78357 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 CNN2P2-201ENST00000443536 909 ntBASIC20.85■□□□□ 0.93
CNTNAP1P78357 CRB3P1-201ENST00000449338 276 ntBASIC20.85■□□□□ 0.93
CNTNAP1P78357 CNN2P3-201ENST00000450201 906 ntBASIC20.85■□□□□ 0.93
CNTNAP1P78357 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms