Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP1S1P61966 AKR1C7P-201ENST00000305623 895 ntBASIC17.78■□□□□ 0.44
AP1S1P61966 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
AP1S1P61966 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.78■□□□□ 0.44
AP1S1P61966 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.78■□□□□ 0.44
AP1S1P61966 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
AP1S1P61966 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
AP1S1P61966 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 KRT8P10-201ENST00000450021 1447 ntBASIC17.78■□□□□ 0.44
AP1S1P61966 AP005117.1-201ENST00000584346 1413 ntBASIC17.78■□□□□ 0.44
AP1S1P61966 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 PMPCAP1-201ENST00000508114 1576 ntBASIC17.78■□□□□ 0.44
AP1S1P61966 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 AC134043.2-201ENST00000624206 2238 ntBASIC17.78■□□□□ 0.44
AP1S1P61966 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.78■□□□□ 0.44
AP1S1P61966 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.77■□□□□ 0.44
AP1S1P61966 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.77■□□□□ 0.44
AP1S1P61966 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
AP1S1P61966 AC133963.1-201ENST00000504166 1679 ntBASIC17.77■□□□□ 0.44
AP1S1P61966 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
AP1S1P61966 AC004870.1-201ENST00000315132 882 ntBASIC17.77■□□□□ 0.44
AP1S1P61966 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.77■□□□□ 0.44
AP1S1P61966 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.77■□□□□ 0.44
AP1S1P61966 FAAHP1-202ENST00000446499 1238 ntBASIC17.77■□□□□ 0.44
AP1S1P61966 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.77■□□□□ 0.44
AP1S1P61966 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.77■□□□□ 0.44
AP1S1P61966 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.77■□□□□ 0.44
AP1S1P61966 RN7SL510P-201ENST00000581311 263 ntBASIC17.77■□□□□ 0.44
AP1S1P61966 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S1P61966 AC018470.1-201ENST00000624790 3129 ntBASIC17.77■□□□□ 0.43
AP1S1P61966 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
AP1S1P61966 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.77■□□□□ 0.43
AP1S1P61966 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
AP1S1P61966 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.77■□□□□ 0.43
AP1S1P61966 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP1S1P61966 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.76■□□□□ 0.43
AP1S1P61966 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.76■□□□□ 0.43
AP1S1P61966 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 AC003669.1-201ENST00000334569 611 ntBASIC17.76■□□□□ 0.43
AP1S1P61966 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
AP1S1P61966 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.76■□□□□ 0.43
AP1S1P61966 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.76■□□□□ 0.43
AP1S1P61966 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 AL355877.3-201ENST00000622820 899 ntBASIC17.76■□□□□ 0.43
AP1S1P61966 AC073592.5-201ENST00000624854 528 ntBASIC17.76■□□□□ 0.43
AP1S1P61966 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.76■□□□□ 0.43
AP1S1P61966 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.76■□□□□ 0.43
AP1S1P61966 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
AP1S1P61966 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.76■□□□□ 0.43
AP1S1P61966 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S1P61966 AL355312.1-201ENST00000407115 2176 ntBASIC17.76■□□□□ 0.43
AP1S1P61966 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S1P61966 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S1P61966 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
AP1S1P61966 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S1P61966 AC068880.1-201ENST00000507289 2297 ntBASIC17.75■□□□□ 0.43
AP1S1P61966 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms