Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 KRT18P31-201ENST00000506277 1292 ntBASIC18.87■□□□□ 0.61
MCCD1P59942 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MCCD1P59942 AP001094.4-201ENST00000579008 2176 ntBASIC18.87■□□□□ 0.61
MCCD1P59942 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.87■□□□□ 0.61
MCCD1P59942 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
MCCD1P59942 AP001269.4-201ENST00000609611 512 ntBASIC18.87■□□□□ 0.61
MCCD1P59942 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MCCD1P59942 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.86■□□□□ 0.61
MCCD1P59942 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MCCD1P59942 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
MCCD1P59942 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.86■□□□□ 0.61
MCCD1P59942 RBM17P3-201ENST00000417687 1192 ntBASIC18.86■□□□□ 0.61
MCCD1P59942 AL020989.1-201ENST00000422979 469 ntBASIC18.86■□□□□ 0.61
MCCD1P59942 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.86■□□□□ 0.61
MCCD1P59942 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 FOSL1P1-201ENST00000511041 816 ntBASIC18.86■□□□□ 0.61
MCCD1P59942 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.86■□□□□ 0.61
MCCD1P59942 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
MCCD1P59942 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.86■□□□□ 0.61
MCCD1P59942 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.86■□□□□ 0.61
MCCD1P59942 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.86■□□□□ 0.61
MCCD1P59942 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MCCD1P59942 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.85■□□□□ 0.61
MCCD1P59942 AC148477.5-201ENST00000625164 1645 ntBASIC18.85■□□□□ 0.61
MCCD1P59942 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.85■□□□□ 0.61
MCCD1P59942 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.85■□□□□ 0.61
MCCD1P59942 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.85■□□□□ 0.61
MCCD1P59942 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.85■□□□□ 0.61
MCCD1P59942 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.85■□□□□ 0.61
MCCD1P59942 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.85■□□□□ 0.61
MCCD1P59942 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MCCD1P59942 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.85■□□□□ 0.61
MCCD1P59942 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.85■□□□□ 0.61
MCCD1P59942 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MCCD1P59942 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MCCD1P59942 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MCCD1P59942 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.84■□□□□ 0.61
MCCD1P59942 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.84■□□□□ 0.61
MCCD1P59942 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MCCD1P59942 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MCCD1P59942 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MCCD1P59942 LINC02012-201ENST00000608206 1725 ntBASIC18.84■□□□□ 0.61
MCCD1P59942 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.84■□□□□ 0.61
MCCD1P59942 ACTG1P4-201ENST00000425123 1122 ntBASIC18.84■□□□□ 0.61
MCCD1P59942 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.84■□□□□ 0.61
MCCD1P59942 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.84■□□□□ 0.61
MCCD1P59942 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.84■□□□□ 0.61
MCCD1P59942 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 AL121772.3-201ENST00000610840 674 ntBASIC18.84■□□□□ 0.61
MCCD1P59942 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.84■□□□□ 0.61
MCCD1P59942 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MCCD1P59942 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms