Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 AC103564.2-201ENST00000432853 1299 ntBASIC19.47■□□□□ 0.71
PEX3P56589 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PEX3P56589 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PEX3P56589 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PEX3P56589 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 AL049757.1-201ENST00000616842 1596 ntBASIC19.46■□□□□ 0.71
PEX3P56589 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 ABCD1P5-201ENST00000445663 754 ntBASIC19.46■□□□□ 0.71
PEX3P56589 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.46■□□□□ 0.71
PEX3P56589 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.46■□□□□ 0.71
PEX3P56589 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PEX3P56589 AP001269.4-201ENST00000609611 512 ntBASIC19.46■□□□□ 0.71
PEX3P56589 AC019129.2-201ENST00000609837 1235 ntBASIC19.46■□□□□ 0.71
PEX3P56589 REXO1L6P-202ENST00000619970 1078 ntBASIC19.46■□□□□ 0.71
PEX3P56589 AL691432.3-201ENST00000621860 400 ntBASIC19.46■□□□□ 0.71
PEX3P56589 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PEX3P56589 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PEX3P56589 AC090340.1-201ENST00000620778 4980 ntBASIC19.46■□□□□ 0.71
PEX3P56589 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.46■□□□□ 0.71
PEX3P56589 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PEX3P56589 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PEX3P56589 AL355312.1-201ENST00000407115 2176 ntBASIC19.46■□□□□ 0.71
PEX3P56589 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX3P56589 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
PEX3P56589 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.45■□□□□ 0.7
PEX3P56589 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.45■□□□□ 0.7
PEX3P56589 KRT8P10-201ENST00000450021 1447 ntBASIC19.45■□□□□ 0.7
PEX3P56589 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PEX3P56589 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX3P56589 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.45■□□□□ 0.7
PEX3P56589 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX3P56589 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PEX3P56589 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX3P56589 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX3P56589 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PEX3P56589 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.45■□□□□ 0.7
PEX3P56589 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PEX3P56589 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.45■□□□□ 0.7
PEX3P56589 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.45■□□□□ 0.7
PEX3P56589 AC109462.3-201ENST00000573934 613 ntBASIC19.45■□□□□ 0.7
PEX3P56589 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.45■□□□□ 0.7
PEX3P56589 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.45■□□□□ 0.7
PEX3P56589 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PEX3P56589 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX3P56589 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PEX3P56589 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX3P56589 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PEX3P56589 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.44■□□□□ 0.7
PEX3P56589 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
PEX3P56589 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PEX3P56589 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PEX3P56589 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.44■□□□□ 0.7
PEX3P56589 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.44■□□□□ 0.7
PEX3P56589 SAPCD2P3-201ENST00000455031 850 ntBASIC19.44■□□□□ 0.7
PEX3P56589 AF238378.1-201ENST00000526806 358 ntBASIC19.44■□□□□ 0.7
PEX3P56589 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PEX3P56589 AL121894.2-201ENST00000602977 491 ntBASIC19.44■□□□□ 0.7
PEX3P56589 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PEX3P56589 AD001527.2-201ENST00000622994 785 ntBASIC19.44■□□□□ 0.7
PEX3P56589 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.44■□□□□ 0.7
PEX3P56589 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.44■□□□□ 0.7
PEX3P56589 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX3P56589 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PEX3P56589 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX3P56589 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms