Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LIMK2P53671 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.83■□□□□ 0.44
LIMK2P53671 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.83■□□□□ 0.44
LIMK2P53671 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.83■□□□□ 0.44
LIMK2P53671 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LIMK2P53671 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.83■□□□□ 0.44
LIMK2P53671 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.83■□□□□ 0.44
LIMK2P53671 PRELID1P1-202ENST00000567272 903 ntBASIC17.83■□□□□ 0.44
LIMK2P53671 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.83■□□□□ 0.44
LIMK2P53671 AP002414.4-201ENST00000589764 1148 ntBASIC17.83■□□□□ 0.44
LIMK2P53671 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.83■□□□□ 0.44
LIMK2P53671 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LIMK2P53671 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LIMK2P53671 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.83■□□□□ 0.44
LIMK2P53671 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LIMK2P53671 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.83■□□□□ 0.44
LIMK2P53671 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LIMK2P53671 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LIMK2P53671 AC012313.1-201ENST00000593393 3059 ntBASIC17.83■□□□□ 0.44
LIMK2P53671 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.82■□□□□ 0.44
LIMK2P53671 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.82■□□□□ 0.44
LIMK2P53671 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.82■□□□□ 0.44
LIMK2P53671 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 AP001094.4-201ENST00000579008 2176 ntBASIC17.82■□□□□ 0.44
LIMK2P53671 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.82■□□□□ 0.44
LIMK2P53671 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.82■□□□□ 0.44
LIMK2P53671 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LIMK2P53671 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.82■□□□□ 0.44
LIMK2P53671 AC026396.1-201ENST00000419388 421 ntBASIC17.82■□□□□ 0.44
LIMK2P53671 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 KRT18P65-201ENST00000439811 1286 ntBASIC17.82■□□□□ 0.44
LIMK2P53671 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.82■□□□□ 0.44
LIMK2P53671 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.82■□□□□ 0.44
LIMK2P53671 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.82■□□□□ 0.44
LIMK2P53671 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LIMK2P53671 RNF126P1-202ENST00000569893 925 ntBASIC17.82■□□□□ 0.44
LIMK2P53671 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.82■□□□□ 0.44
LIMK2P53671 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 REXO1L11P-201ENST00000620964 1927 ntBASIC17.82■□□□□ 0.44
LIMK2P53671 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIMK2P53671 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.82■□□□□ 0.44
LIMK2P53671 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.82■□□□□ 0.44
LIMK2P53671 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LIMK2P53671 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 DDX43P3-201ENST00000441064 443 ntBASIC17.81■□□□□ 0.44
LIMK2P53671 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.81■□□□□ 0.44
LIMK2P53671 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 AC024563.2-201ENST00000603282 481 ntBASIC17.81■□□□□ 0.44
LIMK2P53671 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LIMK2P53671 LINC01451-201ENST00000623792 534 ntBASIC17.81■□□□□ 0.44
LIMK2P53671 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LIMK2P53671 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LIMK2P53671 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
LIMK2P53671 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIMK2P53671 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.8■□□□□ 0.44
LIMK2P53671 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 KRT8P47-201ENST00000604727 1398 ntBASIC17.8■□□□□ 0.44
LIMK2P53671 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 KRT18P1-202ENST00000452408 1331 ntBASIC17.8■□□□□ 0.44
LIMK2P53671 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms