Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC134043.2-201ENST00000624206 2238 ntBASIC17.06■□□□□ 0.32
RAB28P51157 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 AL049757.1-201ENST00000616842 1596 ntBASIC17.06■□□□□ 0.32
RAB28P51157 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
RAB28P51157 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RAB28P51157 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB28P51157 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 RBM17P3-201ENST00000417687 1192 ntBASIC17.06■□□□□ 0.32
RAB28P51157 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB28P51157 SAPCD2P3-201ENST00000455031 850 ntBASIC17.06■□□□□ 0.32
RAB28P51157 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 IGHV3-52-201ENST00000519770 353 ntBASIC17.06■□□□□ 0.32
RAB28P51157 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RAB28P51157 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB28P51157 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB28P51157 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB28P51157 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB28P51157 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RAB28P51157 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RAB28P51157 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB28P51157 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 AL353593.2-201ENST00000602529 1483 ntBASIC17.05■□□□□ 0.32
RAB28P51157 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 LINC00304-203ENST00000565008 1864 ntBASIC17.05■□□□□ 0.32
RAB28P51157 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB28P51157 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB28P51157 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 AC106795.1-205ENST00000512851 1056 ntBASIC17.05■□□□□ 0.32
RAB28P51157 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB28P51157 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.05■□□□□ 0.32
RAB28P51157 AC109462.3-201ENST00000573934 613 ntBASIC17.05■□□□□ 0.32
RAB28P51157 RN7SL510P-201ENST00000581311 263 ntBASIC17.05■□□□□ 0.32
RAB28P51157 AP001269.4-201ENST00000609611 512 ntBASIC17.05■□□□□ 0.32
RAB28P51157 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB28P51157 AP000867.4-201ENST00000641616 219 ntBASIC17.05■□□□□ 0.32
RAB28P51157 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB28P51157 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB28P51157 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RAB28P51157 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB28P51157 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB28P51157 KRT8P10-201ENST00000450021 1447 ntBASIC17.04■□□□□ 0.32
RAB28P51157 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RAB28P51157 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 AC068880.1-201ENST00000507289 2297 ntBASIC17.04■□□□□ 0.32
RAB28P51157 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB28P51157 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 AL355312.1-201ENST00000407115 2176 ntBASIC17.04■□□□□ 0.32
RAB28P51157 AKR1C7P-201ENST00000305623 895 ntBASIC17.04■□□□□ 0.32
RAB28P51157 AC004870.1-201ENST00000315132 882 ntBASIC17.04■□□□□ 0.32
RAB28P51157 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RAB28P51157 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB28P51157 MYCLP1-201ENST00000372451 1075 ntBASIC17.04■□□□□ 0.32
RAB28P51157 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RAB28P51157 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB28P51157 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RAB28P51157 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.04■□□□□ 0.32
RAB28P51157 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RAB28P51157 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAB28P51157 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB28P51157 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB28P51157 AP005117.1-201ENST00000584346 1413 ntBASIC17.04■□□□□ 0.32
RAB28P51157 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB28P51157 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB28P51157 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms