Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RNF144AP50876 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RNF144AP50876 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
RNF144AP50876 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF144AP50876 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF144AP50876 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 TSPY22P-201ENST00000427496 604 ntBASIC16.45■□□□□ 0.22
RNF144AP50876 KRT18P65-201ENST00000439811 1286 ntBASIC16.45■□□□□ 0.22
RNF144AP50876 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 KRT89P-201ENST00000620027 1478 ntBASIC16.45■□□□□ 0.22
RNF144AP50876 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RNF144AP50876 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF144AP50876 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF144AP50876 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RNF144AP50876 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF144AP50876 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RNF144AP50876 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF144AP50876 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF144AP50876 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF144AP50876 AC112698.1-201ENST00000510299 916 ntBASIC16.44■□□□□ 0.22
RNF144AP50876 KRT18P35-201ENST00000510488 1269 ntBASIC16.44■□□□□ 0.22
RNF144AP50876 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF144AP50876 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
RNF144AP50876 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RNF144AP50876 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RNF144AP50876 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF144AP50876 AC005332.1-201ENST00000577698 1310 ntBASIC16.44■□□□□ 0.22
RNF144AP50876 AC022898.2-201ENST00000616822 1312 ntBASIC16.44■□□□□ 0.22
RNF144AP50876 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF144AP50876 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RNF144AP50876 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF144AP50876 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF144AP50876 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF144AP50876 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF144AP50876 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF144AP50876 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF144AP50876 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.43■□□□□ 0.22
RNF144AP50876 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF144AP50876 AC011498.5-201ENST00000592027 486 ntBASIC16.43■□□□□ 0.22
RNF144AP50876 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF144AP50876 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RNF144AP50876 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RNF144AP50876 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms