Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 PCDH8P1-201ENST00000428983 2773 ntBASIC14.5□□□□□ -0.09
NKX2-1P43699 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-1P43699 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NKX2-1P43699 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-1P43699 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NKX2-1P43699 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.49□□□□□ -0.09
NKX2-1P43699 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NKX2-1P43699 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-1P43699 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.49□□□□□ -0.09
NKX2-1P43699 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX2-1P43699 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 DOC2GP-204ENST00000639052 2548 ntBASIC14.49□□□□□ -0.09
NKX2-1P43699 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX2-1P43699 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX2-1P43699 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-1P43699 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-1P43699 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-1P43699 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-1P43699 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX2-1P43699 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
NKX2-1P43699 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX2-1P43699 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 CA15P1-201ENST00000481698 905 ntBASIC14.48□□□□□ -0.09
NKX2-1P43699 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-1P43699 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-1P43699 AC073195.1-201ENST00000607241 877 ntBASIC14.48□□□□□ -0.09
NKX2-1P43699 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
NKX2-1P43699 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NKX2-1P43699 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX2-1P43699 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-1P43699 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-1P43699 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX2-1P43699 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms