Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA4P43681 AL645608.8-201ENST00000606034 2086 ntBASIC17.83■□□□□ 0.45
CHRNA4P43681 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 AC246785.2-201ENST00000432512 513 ntBASIC17.83■□□□□ 0.44
CHRNA4P43681 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.83■□□□□ 0.44
CHRNA4P43681 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA4P43681 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA4P43681 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA4P43681 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHRNA4P43681 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA4P43681 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA4P43681 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA4P43681 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHRNA4P43681 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA4P43681 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA4P43681 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA4P43681 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA4P43681 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHRNA4P43681 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHRNA4P43681 COX5BP2-201ENST00000392354 334 ntBASIC17.82■□□□□ 0.44
CHRNA4P43681 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNA4P43681 UPK3BP1-201ENST00000428678 509 ntBASIC17.82■□□□□ 0.44
CHRNA4P43681 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.82■□□□□ 0.44
CHRNA4P43681 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA4P43681 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA4P43681 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA4P43681 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHRNA4P43681 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.82■□□□□ 0.44
CHRNA4P43681 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.82■□□□□ 0.44
CHRNA4P43681 LINC01451-201ENST00000623792 534 ntBASIC17.82■□□□□ 0.44
CHRNA4P43681 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA4P43681 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA4P43681 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA4P43681 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA4P43681 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNA4P43681 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA4P43681 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA4P43681 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA4P43681 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 SIRPAP1-201ENST00000448467 1770 ntBASIC17.81■□□□□ 0.44
CHRNA4P43681 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA4P43681 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA4P43681 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA4P43681 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA4P43681 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNA4P43681 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 ATP5G2P1-201ENST00000433580 426 ntBASIC17.81■□□□□ 0.44
CHRNA4P43681 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA4P43681 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNA4P43681 VENTXP7-201ENST00000475503 772 ntBASIC17.81■□□□□ 0.44
CHRNA4P43681 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNA4P43681 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNA4P43681 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNA4P43681 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA4P43681 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CHRNA4P43681 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA4P43681 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA4P43681 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA4P43681 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.81■□□□□ 0.44
CHRNA4P43681 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA4P43681 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA4P43681 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 AC012313.1-201ENST00000593393 3059 ntBASIC17.8■□□□□ 0.44
CHRNA4P43681 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA4P43681 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA4P43681 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA4P43681 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNA4P43681 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CHRNA4P43681 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms