Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF1P30408 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.78■■□□□ 1.08
TM4SF1P30408 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TM4SF1P30408 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF1P30408 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF1P30408 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF1P30408 KRT8P48-201ENST00000515599 1220 ntBASIC21.78■■□□□ 1.08
TM4SF1P30408 RNA5SP421-201ENST00000516864 134 ntBASIC21.78■■□□□ 1.08
TM4SF1P30408 AC190387.1-201ENST00000551683 408 ntBASIC21.78■■□□□ 1.08
TM4SF1P30408 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF1P30408 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF1P30408 AF228730.6-201ENST00000641497 218 ntBASIC21.78■■□□□ 1.08
TM4SF1P30408 AC084121.3-201ENST00000641716 218 ntBASIC21.78■■□□□ 1.08
TM4SF1P30408 AC105233.6-201ENST00000642093 218 ntBASIC21.78■■□□□ 1.08
TM4SF1P30408 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF1P30408 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF1P30408 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF1P30408 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF1P30408 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF1P30408 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF1P30408 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF1P30408 SLC25A24-204ENST00000569674 2357 ntBASIC21.77■■□□□ 1.08
TM4SF1P30408 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF1P30408 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TM4SF1P30408 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF1P30408 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
TM4SF1P30408 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.77■■□□□ 1.08
TM4SF1P30408 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.77■■□□□ 1.08
TM4SF1P30408 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF1P30408 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.77■■□□□ 1.08
TM4SF1P30408 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 AC099522.2-201ENST00000607001 744 ntBASIC21.77■■□□□ 1.08
TM4SF1P30408 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF1P30408 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF1P30408 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF1P30408 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TM4SF1P30408 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TM4SF1P30408 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
TM4SF1P30408 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.76■■□□□ 1.07
TM4SF1P30408 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.76■■□□□ 1.07
TM4SF1P30408 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
TM4SF1P30408 TIMM8BP1-201ENST00000452384 211 ntBASIC21.76■■□□□ 1.07
TM4SF1P30408 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.76■■□□□ 1.07
TM4SF1P30408 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.76■■□□□ 1.07
TM4SF1P30408 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.76■■□□□ 1.07
TM4SF1P30408 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF1P30408 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TM4SF1P30408 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TM4SF1P30408 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.75■■□□□ 1.07
TM4SF1P30408 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.75■■□□□ 1.07
TM4SF1P30408 MYCLP1-201ENST00000372451 1075 ntBASIC21.75■■□□□ 1.07
TM4SF1P30408 AC002056.1-201ENST00000395613 760 ntBASIC21.75■■□□□ 1.07
TM4SF1P30408 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TM4SF1P30408 AL355306.1-201ENST00000415580 579 ntBASIC21.75■■□□□ 1.07
TM4SF1P30408 AC015922.1-201ENST00000421102 1152 ntBASIC21.75■■□□□ 1.07
TM4SF1P30408 AL671277.1-201ENST00000429656 993 ntBASIC21.75■■□□□ 1.07
TM4SF1P30408 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.75■■□□□ 1.07
TM4SF1P30408 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 AC067863.1-201ENST00000494933 530 ntBASIC21.75■■□□□ 1.07
TM4SF1P30408 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 AC051619.7-201ENST00000568314 623 ntBASIC21.75■■□□□ 1.07
TM4SF1P30408 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM4SF1P30408 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.75■■□□□ 1.07
TM4SF1P30408 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms