Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
VARSP26640 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
VARSP26640 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VARSP26640 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 AL645608.8-201ENST00000606034 2086 ntBASIC17.41■□□□□ 0.38
VARSP26640 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.41■□□□□ 0.38
VARSP26640 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VARSP26640 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.41■□□□□ 0.38
VARSP26640 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 SPDYE13P-201ENST00000445314 798 ntBASIC17.41■□□□□ 0.38
VARSP26640 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.41■□□□□ 0.38
VARSP26640 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.41■□□□□ 0.38
VARSP26640 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.41■□□□□ 0.38
VARSP26640 AC083849.1-201ENST00000615227 514 ntBASIC17.41■□□□□ 0.38
VARSP26640 AC004263.2-201ENST00000617183 678 ntBASIC17.41■□□□□ 0.38
VARSP26640 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.41■□□□□ 0.38
VARSP26640 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.41■□□□□ 0.38
VARSP26640 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARSP26640 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.41■□□□□ 0.38
VARSP26640 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
VARSP26640 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VARSP26640 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VARSP26640 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.4■□□□□ 0.38
VARSP26640 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.4■□□□□ 0.38
VARSP26640 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.4■□□□□ 0.38
VARSP26640 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 AC113404.2-201ENST00000507884 177 ntBASIC17.4■□□□□ 0.38
VARSP26640 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.4■□□□□ 0.38
VARSP26640 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VARSP26640 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VARSP26640 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARSP26640 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VARSP26640 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.39■□□□□ 0.38
VARSP26640 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VARSP26640 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 KRT89P-201ENST00000620027 1478 ntBASIC17.39■□□□□ 0.37
VARSP26640 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VARSP26640 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 KRT18P55-202ENST00000578578 1546 ntBASIC17.39■□□□□ 0.37
VARSP26640 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 MIR662-201ENST00000384847 95 ntBASIC17.39■□□□□ 0.37
VARSP26640 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARSP26640 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms