Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.07■□□□□ 0.96
NCLP19338 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NCLP19338 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.07■□□□□ 0.96
NCLP19338 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.07■□□□□ 0.96
NCLP19338 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.07■□□□□ 0.96
NCLP19338 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCLP19338 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.07■□□□□ 0.96
NCLP19338 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NCLP19338 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NCLP19338 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.06■□□□□ 0.96
NCLP19338 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.06■□□□□ 0.96
NCLP19338 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.06■□□□□ 0.96
NCLP19338 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.06■□□□□ 0.96
NCLP19338 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.06■□□□□ 0.96
NCLP19338 SLC25A3P1-201ENST00000443844 931 ntBASIC21.06■□□□□ 0.96
NCLP19338 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.06■□□□□ 0.96
NCLP19338 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NCLP19338 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NCLP19338 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.06■□□□□ 0.96
NCLP19338 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
NCLP19338 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCLP19338 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCLP19338 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.05■□□□□ 0.96
NCLP19338 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.05■□□□□ 0.96
NCLP19338 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCLP19338 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.05■□□□□ 0.96
NCLP19338 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCLP19338 MIR149-201ENST00000384879 89 ntBASIC21.05■□□□□ 0.96
NCLP19338 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.05■□□□□ 0.96
NCLP19338 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
NCLP19338 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCLP19338 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCLP19338 TERF1P1-201ENST00000311003 1181 ntBASIC21.04■□□□□ 0.96
NCLP19338 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.04■□□□□ 0.96
NCLP19338 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.04■□□□□ 0.96
NCLP19338 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms