Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 AC008764.6-201ENST00000595909 2069 ntBASIC18.7■□□□□ 0.58
PTPN1P18031 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTPN1P18031 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN1P18031 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PTPN1P18031 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTPN1P18031 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTPN1P18031 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 REXO1L11P-201ENST00000620964 1927 ntBASIC18.69■□□□□ 0.58
PTPN1P18031 AL356309.3-201ENST00000624132 1934 ntBASIC18.69■□□□□ 0.58
PTPN1P18031 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN1P18031 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN1P18031 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 FDX1P1-201ENST00000449115 551 ntBASIC18.69■□□□□ 0.58
PTPN1P18031 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTPN1P18031 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPN1P18031 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPN1P18031 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPN1P18031 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN1P18031 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN1P18031 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN1P18031 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN1P18031 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PTPN1P18031 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PTPN1P18031 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN1P18031 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN1P18031 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.68■□□□□ 0.58
PTPN1P18031 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.68■□□□□ 0.58
PTPN1P18031 SCARNA2-201ENST00000458748 420 ntBASIC18.68■□□□□ 0.58
PTPN1P18031 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.68■□□□□ 0.58
PTPN1P18031 SART3-203ENST00000546611 1184 ntBASIC18.68■□□□□ 0.58
PTPN1P18031 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN1P18031 NKAPP1-205ENST00000585790 367 ntBASIC18.68■□□□□ 0.58
PTPN1P18031 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN1P18031 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN1P18031 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PTPN1P18031 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN1P18031 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN1P18031 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 AC132938.5-201ENST00000624980 1813 ntBASIC18.67■□□□□ 0.58
PTPN1P18031 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 AC079776.2-201ENST00000641154 1609 ntBASIC18.67■□□□□ 0.58
PTPN1P18031 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 HCG11-201ENST00000411553 5696 ntBASIC18.67■□□□□ 0.58
PTPN1P18031 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN1P18031 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN1P18031 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN1P18031 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 MRPL3P1-201ENST00000400109 1033 ntBASIC18.67■□□□□ 0.58
PTPN1P18031 AC005104.2-201ENST00000427818 678 ntBASIC18.67■□□□□ 0.58
PTPN1P18031 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN1P18031 AC002558.1-201ENST00000488906 803 ntBASIC18.67■□□□□ 0.58
PTPN1P18031 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN1P18031 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN1P18031 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN1P18031 IGHV3-52-201ENST00000519770 353 ntBASIC18.67■□□□□ 0.58
PTPN1P18031 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN1P18031 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN1P18031 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN1P18031 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN1P18031 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTPN1P18031 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms