Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN1P12814 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN1P12814 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN1P12814 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ACTN1P12814 UPF3AP3-201ENST00000420996 769 ntBASIC19.81■□□□□ 0.76
ACTN1P12814 AC098831.1-202ENST00000438821 336 ntBASIC19.81■□□□□ 0.76
ACTN1P12814 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.81■□□□□ 0.76
ACTN1P12814 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.81■□□□□ 0.76
ACTN1P12814 AC068472.1-201ENST00000474589 881 ntBASIC19.81■□□□□ 0.76
ACTN1P12814 IGHV3-22-201ENST00000520721 359 ntBASIC19.81■□□□□ 0.76
ACTN1P12814 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.81■□□□□ 0.76
ACTN1P12814 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.81■□□□□ 0.76
ACTN1P12814 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.81■□□□□ 0.76
ACTN1P12814 AC140113.2-201ENST00000604370 208 ntBASIC19.81■□□□□ 0.76
ACTN1P12814 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.81■□□□□ 0.76
ACTN1P12814 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN1P12814 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN1P12814 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN1P12814 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.81■□□□□ 0.76
ACTN1P12814 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN1P12814 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
ACTN1P12814 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ACTN1P12814 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.8■□□□□ 0.76
ACTN1P12814 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.8■□□□□ 0.76
ACTN1P12814 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.8■□□□□ 0.76
ACTN1P12814 AC021087.4-201ENST00000563761 564 ntBASIC19.8■□□□□ 0.76
ACTN1P12814 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.8■□□□□ 0.76
ACTN1P12814 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN1P12814 MIR3687-2-201ENST00000577708 61 ntBASIC19.8■□□□□ 0.76
ACTN1P12814 AL356488.2-201ENST00000602755 427 ntBASIC19.8■□□□□ 0.76
ACTN1P12814 MIR3687-1-201ENST00000614492 61 ntBASIC19.8■□□□□ 0.76
ACTN1P12814 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.8■□□□□ 0.76
ACTN1P12814 AC079781.4-201ENST00000641908 219 ntBASIC19.8■□□□□ 0.76
ACTN1P12814 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ACTN1P12814 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN1P12814 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN1P12814 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN1P12814 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN1P12814 INTS4P1-201ENST00000438455 1935 ntBASIC19.8■□□□□ 0.76
ACTN1P12814 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.79■□□□□ 0.76
ACTN1P12814 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
ACTN1P12814 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ACTN1P12814 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.79■□□□□ 0.76
ACTN1P12814 AP005117.1-201ENST00000584346 1413 ntBASIC19.79■□□□□ 0.76
ACTN1P12814 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.79■□□□□ 0.76
ACTN1P12814 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 AP000997.3-201ENST00000623333 2250 ntBASIC19.79■□□□□ 0.76
ACTN1P12814 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ACTN1P12814 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN1P12814 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN1P12814 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.78■□□□□ 0.76
ACTN1P12814 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.78■□□□□ 0.76
ACTN1P12814 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.78■□□□□ 0.76
ACTN1P12814 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.78■□□□□ 0.76
ACTN1P12814 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTN1P12814 RPS2P1-201ENST00000434010 821 ntBASIC19.78■□□□□ 0.76
ACTN1P12814 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.78■□□□□ 0.76
ACTN1P12814 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms