Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.74■□□□□ 0.43
APOA4P06727 AC005332.3-201ENST00000589904 676 ntBASIC17.74■□□□□ 0.43
APOA4P06727 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.74■□□□□ 0.43
APOA4P06727 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
APOA4P06727 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.74■□□□□ 0.43
APOA4P06727 AL353692.3-201ENST00000407031 1396 ntBASIC17.74■□□□□ 0.43
APOA4P06727 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
APOA4P06727 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.74■□□□□ 0.43
APOA4P06727 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOA4P06727 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.73■□□□□ 0.43
APOA4P06727 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.73■□□□□ 0.43
APOA4P06727 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 HLA-J-201ENST00000462773 1622 ntBASIC17.73■□□□□ 0.43
APOA4P06727 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
APOA4P06727 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 TSPY12P-201ENST00000421279 868 ntBASIC17.73■□□□□ 0.43
APOA4P06727 KRT18P65-201ENST00000439811 1286 ntBASIC17.73■□□□□ 0.43
APOA4P06727 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.73■□□□□ 0.43
APOA4P06727 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.73■□□□□ 0.43
APOA4P06727 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
APOA4P06727 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
APOA4P06727 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
APOA4P06727 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
APOA4P06727 LINC00304-203ENST00000565008 1864 ntBASIC17.73■□□□□ 0.43
APOA4P06727 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
APOA4P06727 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOA4P06727 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 AL121761.2-201ENST00000598007 1648 ntBASIC17.72■□□□□ 0.43
APOA4P06727 Z83836.1-201ENST00000624605 1642 ntBASIC17.72■□□□□ 0.43
APOA4P06727 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.72■□□□□ 0.43
APOA4P06727 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.72■□□□□ 0.43
APOA4P06727 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.72■□□□□ 0.43
APOA4P06727 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
APOA4P06727 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
APOA4P06727 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 MIR1224-201ENST00000408193 85 ntBASIC17.72■□□□□ 0.43
APOA4P06727 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.72■□□□□ 0.43
APOA4P06727 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.72■□□□□ 0.43
APOA4P06727 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.72■□□□□ 0.43
APOA4P06727 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.72■□□□□ 0.43
APOA4P06727 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.72■□□□□ 0.43
APOA4P06727 AL390719.2-201ENST00000606993 987 ntBASIC17.72■□□□□ 0.43
APOA4P06727 LINC01451-201ENST00000623792 534 ntBASIC17.72■□□□□ 0.43
APOA4P06727 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
APOA4P06727 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOA4P06727 AP001094.4-201ENST00000579008 2176 ntBASIC17.72■□□□□ 0.43
APOA4P06727 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.72■□□□□ 0.43
APOA4P06727 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
APOA4P06727 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
APOA4P06727 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms