Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A1P02452 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COL1A1P02452 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COL1A1P02452 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.16■□□□□ 0.98
COL1A1P02452 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
COL1A1P02452 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.15■□□□□ 0.98
COL1A1P02452 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 AC006116.8-202ENST00000587620 1550 ntBASIC21.15■□□□□ 0.98
COL1A1P02452 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
COL1A1P02452 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.15■□□□□ 0.98
COL1A1P02452 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.15■□□□□ 0.98
COL1A1P02452 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.15■□□□□ 0.98
COL1A1P02452 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 IGLL3P-201ENST00000412472 434 ntBASIC21.15■□□□□ 0.98
COL1A1P02452 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.15■□□□□ 0.98
COL1A1P02452 KRT18P2-201ENST00000447938 1258 ntBASIC21.15■□□□□ 0.98
COL1A1P02452 IGHV3-52-201ENST00000519770 353 ntBASIC21.15■□□□□ 0.98
COL1A1P02452 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.15■□□□□ 0.98
COL1A1P02452 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.15■□□□□ 0.98
COL1A1P02452 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
COL1A1P02452 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.15■□□□□ 0.98
COL1A1P02452 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.15■□□□□ 0.98
COL1A1P02452 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.15■□□□□ 0.98
COL1A1P02452 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 LINC00304-203ENST00000565008 1864 ntBASIC21.15■□□□□ 0.98
COL1A1P02452 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
COL1A1P02452 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL1A1P02452 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.15■□□□□ 0.98
COL1A1P02452 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A1P02452 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A1P02452 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A1P02452 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A1P02452 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
COL1A1P02452 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.14■□□□□ 0.98
COL1A1P02452 ALG1L5P-201ENST00000482043 771 ntBASIC21.14■□□□□ 0.98
COL1A1P02452 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.14■□□□□ 0.98
COL1A1P02452 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.14■□□□□ 0.98
COL1A1P02452 AC008667.4-201ENST00000607370 168 ntBASIC21.14■□□□□ 0.98
COL1A1P02452 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.14■□□□□ 0.98
COL1A1P02452 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.14■□□□□ 0.98
COL1A1P02452 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
COL1A1P02452 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A1P02452 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A1P02452 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.14■□□□□ 0.97
COL1A1P02452 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
COL1A1P02452 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A1P02452 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A1P02452 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A1P02452 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.14■□□□□ 0.97
COL1A1P02452 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A1P02452 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COL1A1P02452 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A1P02452 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
COL1A1P02452 IGHV3-65-201ENST00000523210 341 ntBASIC21.13■□□□□ 0.97
COL1A1P02452 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A1P02452 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A1P02452 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 AC097637.2-201ENST00000624096 1997 ntBASIC21.13■□□□□ 0.97
COL1A1P02452 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COL1A1P02452 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A1P02452 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 LINC00982-205ENST00000420957 435 ntBASIC21.13■□□□□ 0.97
COL1A1P02452 METTL21AP1-201ENST00000438852 635 ntBASIC21.13■□□□□ 0.97
COL1A1P02452 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A1P02452 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.13■□□□□ 0.97
COL1A1P02452 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A1P02452 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A1P02452 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.12■□□□□ 0.97
COL1A1P02452 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A1P02452 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A1P02452 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms