Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 AC002310.6-201ENST00000624451 1377 ntBASIC15.78■□□□□ 0.12
CLDN1O95832 Z98044.1-201ENST00000632503 1764 ntBASIC15.78■□□□□ 0.12
CLDN1O95832 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN1O95832 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN1O95832 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 MTCL1P1-201ENST00000446207 792 ntBASIC15.78■□□□□ 0.12
CLDN1O95832 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN1O95832 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN1O95832 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN1O95832 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN1O95832 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN1O95832 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN1O95832 AL096865.1-201ENST00000606796 927 ntBASIC15.78■□□□□ 0.12
CLDN1O95832 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN1O95832 AC093028.1-201ENST00000622998 982 ntBASIC15.78■□□□□ 0.12
CLDN1O95832 C20orf181-201ENST00000623918 480 ntBASIC15.78■□□□□ 0.12
CLDN1O95832 AC005593.1-201ENST00000624894 515 ntBASIC15.78■□□□□ 0.12
CLDN1O95832 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN1O95832 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN1O95832 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN1O95832 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN1O95832 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN1O95832 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN1O95832 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLDN1O95832 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN1O95832 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN1O95832 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 CROCCP3-202ENST00000420820 1947 ntBASIC15.77■□□□□ 0.12
CLDN1O95832 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN1O95832 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN1O95832 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CLDN1O95832 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN1O95832 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN1O95832 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.77■□□□□ 0.12
CLDN1O95832 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CLDN1O95832 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN1O95832 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN1O95832 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN1O95832 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.77■□□□□ 0.11
CLDN1O95832 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN1O95832 AL163051.1-201ENST00000569214 1512 ntBASIC15.77■□□□□ 0.11
CLDN1O95832 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN1O95832 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CLDN1O95832 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CLDN1O95832 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN1O95832 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN1O95832 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN1O95832 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN1O95832 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN1O95832 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.77■□□□□ 0.11
CLDN1O95832 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN1O95832 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CLDN1O95832 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CLDN1O95832 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN1O95832 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN1O95832 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN1O95832 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 KRT18P27-201ENST00000427733 1299 ntBASIC15.76■□□□□ 0.11
CLDN1O95832 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN1O95832 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN1O95832 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.76■□□□□ 0.11
CLDN1O95832 AC027612.4-201ENST00000605371 583 ntBASIC15.76■□□□□ 0.11
CLDN1O95832 AL078644.1-201ENST00000609881 752 ntBASIC15.76■□□□□ 0.11
CLDN1O95832 AC068587.9-201ENST00000641814 219 ntBASIC15.76■□□□□ 0.11
CLDN1O95832 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN1O95832 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms