Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RNF216P1-203ENST00000404404 2427 ntBASIC14.82□□□□□ -0.04
SIX6O95475 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 AC034268.1-201ENST00000441047 882 ntBASIC14.82□□□□□ -0.04
SIX6O95475 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.82□□□□□ -0.04
SIX6O95475 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.82□□□□□ -0.04
SIX6O95475 AC133552.2-202ENST00000575694 574 ntBASIC14.82□□□□□ -0.04
SIX6O95475 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SIX6O95475 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.82□□□□□ -0.04
SIX6O95475 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SIX6O95475 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.82□□□□□ -0.04
SIX6O95475 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIX6O95475 AC092068.3-201ENST00000587894 2016 ntBASIC14.82□□□□□ -0.04
SIX6O95475 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SIX6O95475 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
SIX6O95475 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SIX6O95475 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.81□□□□□ -0.04
SIX6O95475 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.81□□□□□ -0.04
SIX6O95475 AC105036.2-201ENST00000569468 176 ntBASIC14.81□□□□□ -0.04
SIX6O95475 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.81□□□□□ -0.04
SIX6O95475 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.81□□□□□ -0.04
SIX6O95475 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 AL163051.1-201ENST00000569214 1512 ntBASIC14.81□□□□□ -0.04
SIX6O95475 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.81□□□□□ -0.04
SIX6O95475 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIX6O95475 AC105917.1-201ENST00000506637 2539 ntBASIC14.81□□□□□ -0.04
SIX6O95475 DBET-201ENST00000630918 3363 ntBASIC14.81□□□□□ -0.04
SIX6O95475 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SIX6O95475 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SIX6O95475 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.8□□□□□ -0.04
SIX6O95475 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.8□□□□□ -0.04
SIX6O95475 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms