Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.22■□□□□ 0.51
TSPAN3O60637 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.22■□□□□ 0.51
TSPAN3O60637 AC122714.2-201ENST00000502787 707 ntBASIC18.22■□□□□ 0.51
TSPAN3O60637 RNPS1P1-201ENST00000507437 918 ntBASIC18.22■□□□□ 0.51
TSPAN3O60637 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TSPAN3O60637 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.22■□□□□ 0.51
TSPAN3O60637 AL662844.1-201ENST00000546340 181 ntBASIC18.22■□□□□ 0.51
TSPAN3O60637 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.22■□□□□ 0.51
TSPAN3O60637 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.22■□□□□ 0.51
TSPAN3O60637 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
TSPAN3O60637 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.22■□□□□ 0.51
TSPAN3O60637 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 AL354751.1-201ENST00000412768 1863 ntBASIC18.22■□□□□ 0.51
TSPAN3O60637 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TSPAN3O60637 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 AC135050.7-201ENST00000624508 2218 ntBASIC18.22■□□□□ 0.51
TSPAN3O60637 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.22■□□□□ 0.51
TSPAN3O60637 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.22■□□□□ 0.51
TSPAN3O60637 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSPAN3O60637 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.21■□□□□ 0.51
TSPAN3O60637 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.21■□□□□ 0.51
TSPAN3O60637 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
TSPAN3O60637 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.21■□□□□ 0.51
TSPAN3O60637 KRT18P67-201ENST00000432816 1264 ntBASIC18.21■□□□□ 0.51
TSPAN3O60637 AF186996.4-201ENST00000467186 377 ntBASIC18.21■□□□□ 0.51
TSPAN3O60637 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.21■□□□□ 0.51
TSPAN3O60637 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.21■□□□□ 0.51
TSPAN3O60637 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.21■□□□□ 0.51
TSPAN3O60637 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.21■□□□□ 0.51
TSPAN3O60637 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TSPAN3O60637 AP000867.4-201ENST00000641616 219 ntBASIC18.21■□□□□ 0.51
TSPAN3O60637 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.21■□□□□ 0.51
TSPAN3O60637 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TSPAN3O60637 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 AL356309.3-201ENST00000624132 1934 ntBASIC18.21■□□□□ 0.51
TSPAN3O60637 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.21■□□□□ 0.51
TSPAN3O60637 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN3O60637 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TSPAN3O60637 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
TSPAN3O60637 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TSPAN3O60637 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TSPAN3O60637 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.2■□□□□ 0.5
TSPAN3O60637 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 KRT18P55-202ENST00000578578 1546 ntBASIC18.2■□□□□ 0.5
TSPAN3O60637 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 SCARNA2-201ENST00000458748 420 ntBASIC18.2■□□□□ 0.5
TSPAN3O60637 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 AC073648.2-201ENST00000510116 352 ntBASIC18.2■□□□□ 0.5
TSPAN3O60637 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.2■□□□□ 0.5
TSPAN3O60637 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 NKAPP1-205ENST00000585790 367 ntBASIC18.2■□□□□ 0.5
TSPAN3O60637 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.2■□□□□ 0.5
TSPAN3O60637 AL773604.1-201ENST00000617417 272 ntBASIC18.2■□□□□ 0.5
TSPAN3O60637 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TSPAN3O60637 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.2■□□□□ 0.5
TSPAN3O60637 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN3O60637 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms