Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC019129.2-201ENST00000609837 1235 ntBASIC18.35■□□□□ 0.53
MSI1O43347 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 AL355877.3-201ENST00000622820 899 ntBASIC18.35■□□□□ 0.53
MSI1O43347 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.35■□□□□ 0.53
MSI1O43347 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.34■□□□□ 0.53
MSI1O43347 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.34■□□□□ 0.53
MSI1O43347 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.34■□□□□ 0.53
MSI1O43347 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MSI1O43347 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.34■□□□□ 0.53
MSI1O43347 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 AC026396.1-201ENST00000419388 421 ntBASIC18.34■□□□□ 0.53
MSI1O43347 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.34■□□□□ 0.53
MSI1O43347 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.34■□□□□ 0.53
MSI1O43347 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.34■□□□□ 0.53
MSI1O43347 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.34■□□□□ 0.53
MSI1O43347 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MSI1O43347 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.34■□□□□ 0.53
MSI1O43347 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.34■□□□□ 0.53
MSI1O43347 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.34■□□□□ 0.53
MSI1O43347 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSI1O43347 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MSI1O43347 AL049757.1-201ENST00000616842 1596 ntBASIC18.34■□□□□ 0.53
MSI1O43347 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
MSI1O43347 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MSI1O43347 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
MSI1O43347 KRT8P10-201ENST00000450021 1447 ntBASIC18.33■□□□□ 0.53
MSI1O43347 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.53
MSI1O43347 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
MSI1O43347 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MSI1O43347 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MSI1O43347 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MSI1O43347 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.33■□□□□ 0.53
MSI1O43347 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MSI1O43347 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
MSI1O43347 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSI1O43347 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSI1O43347 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSI1O43347 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MSI1O43347 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
MSI1O43347 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.33■□□□□ 0.52
MSI1O43347 RBM17P3-201ENST00000417687 1192 ntBASIC18.33■□□□□ 0.52
MSI1O43347 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.33■□□□□ 0.52
MSI1O43347 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.33■□□□□ 0.52
MSI1O43347 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MSI1O43347 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSI1O43347 AP002469.2-201ENST00000531724 424 ntBASIC18.33■□□□□ 0.52
MSI1O43347 AC109462.3-201ENST00000573934 613 ntBASIC18.33■□□□□ 0.52
MSI1O43347 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.33■□□□□ 0.52
MSI1O43347 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSI1O43347 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MSI1O43347 AD001527.2-201ENST00000622994 785 ntBASIC18.33■□□□□ 0.52
MSI1O43347 AP000867.4-201ENST00000641616 219 ntBASIC18.33■□□□□ 0.52
MSI1O43347 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSI1O43347 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
MSI1O43347 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.33■□□□□ 0.52
MSI1O43347 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
MSI1O43347 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MSI1O43347 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSI1O43347 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
MSI1O43347 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.32■□□□□ 0.52
MSI1O43347 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.32■□□□□ 0.52
MSI1O43347 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MSI1O43347 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
MSI1O43347 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.32■□□□□ 0.52
MSI1O43347 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 AL160237.2-201ENST00000556165 472 ntBASIC18.32■□□□□ 0.52
MSI1O43347 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MSI1O43347 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MSI1O43347 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms