Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.33■□□□□ 0.37
TAF4O00268 KRT8P3-201ENST00000519669 1449 ntBASIC17.33■□□□□ 0.36
TAF4O00268 HOXB1-202ENST00000577092 1414 ntBASIC17.33■□□□□ 0.36
TAF4O00268 AC099398.1-201ENST00000567919 2776 ntBASIC17.33■□□□□ 0.36
TAF4O00268 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TAF4O00268 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TAF4O00268 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TAF4O00268 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TAF4O00268 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.33■□□□□ 0.36
TAF4O00268 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TAF4O00268 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TAF4O00268 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.33■□□□□ 0.36
TAF4O00268 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.33■□□□□ 0.36
TAF4O00268 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.33■□□□□ 0.36
TAF4O00268 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TAF4O00268 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TAF4O00268 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.33■□□□□ 0.36
TAF4O00268 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TAF4O00268 AL161938.1-201ENST00000569833 2180 ntBASIC17.33■□□□□ 0.36
TAF4O00268 OR6D1P-202ENST00000641007 5290 ntBASIC17.33■□□□□ 0.36
TAF4O00268 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TAF4O00268 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.33■□□□□ 0.36
TAF4O00268 HLA-J-201ENST00000462773 1622 ntBASIC17.32■□□□□ 0.36
TAF4O00268 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
TAF4O00268 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.32■□□□□ 0.36
TAF4O00268 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.32■□□□□ 0.36
TAF4O00268 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 AC002347.1-201ENST00000569543 541 ntBASIC17.32■□□□□ 0.36
TAF4O00268 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.32■□□□□ 0.36
TAF4O00268 AC011467.4-201ENST00000594891 528 ntBASIC17.32■□□□□ 0.36
TAF4O00268 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 AL139384.1-201ENST00000612143 3047 ntBASIC17.32■□□□□ 0.36
TAF4O00268 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TAF4O00268 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TAF4O00268 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TAF4O00268 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TAF4O00268 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TAF4O00268 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.32■□□□□ 0.36
TAF4O00268 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TAF4O00268 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
TAF4O00268 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.31■□□□□ 0.36
TAF4O00268 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 Z98044.1-201ENST00000632503 1764 ntBASIC17.31■□□□□ 0.36
TAF4O00268 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.31■□□□□ 0.36
TAF4O00268 AL645939.2-201ENST00000427340 991 ntBASIC17.31■□□□□ 0.36
TAF4O00268 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.31■□□□□ 0.36
TAF4O00268 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.31■□□□□ 0.36
TAF4O00268 RNA5SP416-201ENST00000516838 111 ntBASIC17.31■□□□□ 0.36
TAF4O00268 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TAF4O00268 MTDHP5-201ENST00000598980 586 ntBASIC17.31■□□□□ 0.36
TAF4O00268 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.31■□□□□ 0.36
TAF4O00268 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
TAF4O00268 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms