Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 INTS4P1-201ENST00000438455 1935 ntBASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 OR6D1P-203ENST00000641209 4860 ntBASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 KRT18P67-201ENST00000432816 1264 ntBASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 AL355877.3-201ENST00000622820 899 ntBASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 AC022898.2-201ENST00000616822 1312 ntBASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA3F8WFD2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AL031284.1-201ENST00000419297 478 ntBASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AC011467.2-201ENST00000598425 242 ntBASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AP001269.4-201ENST00000609611 512 ntBASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 AC148477.8-201ENST00000624298 468 ntBASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA3F8WFD2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 AC007613.1-201ENST00000572811 2597 ntBASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.09■□□□□ 0.17
NPIPA3F8WFD2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms