Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.12■□□□□ 0.01
TMEM235A6NFC5 AL023803.3-201ENST00000615559 522 ntBASIC15.12■□□□□ 0.01
TMEM235A6NFC5 REXO1L10P-201ENST00000615707 1290 ntBASIC15.12■□□□□ 0.01
TMEM235A6NFC5 REXO1L12P-201ENST00000622156 912 ntBASIC15.12■□□□□ 0.01
TMEM235A6NFC5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 NFIC-211ENST00000641145 8399 ntBASIC15.11■□□□□ 0.01
TMEM235A6NFC5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 AL353719.1-201ENST00000566847 864 ntBASIC15.11■□□□□ 0.01
TMEM235A6NFC5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 AL359736.2-201ENST00000621992 437 ntBASIC15.11■□□□□ 0.01
TMEM235A6NFC5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM235A6NFC5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 SLC25A1P2-201ENST00000430693 912 ntBASIC15.1■□□□□ 0.01
TMEM235A6NFC5 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.1■□□□□ 0.01
TMEM235A6NFC5 TSPY17P-201ENST00000450329 467 ntBASIC15.1■□□□□ 0.01
TMEM235A6NFC5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 AP005242.2-201ENST00000580065 1175 ntBASIC15.1■□□□□ 0.01
TMEM235A6NFC5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TMEM235A6NFC5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms