Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 AC005332.1-201ENST00000577698 1310 ntBASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 AL023806.1-201ENST00000603994 1649 ntBASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 HYMAI.1-201ENST00000620949 238 ntBASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 AC024563.2-201ENST00000603282 481 ntBASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB3Q9Y5G1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 LINC01311-201ENST00000565162 1445 ntBASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 AC083849.1-201ENST00000615227 514 ntBASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 AC099398.1-201ENST00000567919 2776 ntBASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB3Q9Y5G1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB3Q9Y5G1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms