Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 AL096828.2-201ENST00000567259 1965 ntBASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA1Q9UND3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 PHGDH-209ENST00000641074 1780 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 AL590627.1-203ENST00000421194 1026 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 MTCL1P1-201ENST00000446207 792 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 AP001005.1-201ENST00000571755 1248 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 AC005336.2-201ENST00000593183 939 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 AC008608.2-201ENST00000606089 416 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 AC009154.2-201ENST00000621177 724 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA1Q9UND3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA1Q9UND3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NPIPA1Q9UND3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA1Q9UND3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA1Q9UND3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA1Q9UND3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.33■□□□□ 0.21
NPIPA1Q9UND3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA1Q9UND3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 AF186996.4-201ENST00000467186 377 ntBASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 AL773604.1-201ENST00000617417 272 ntBASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA1Q9UND3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms